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SRX251090: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-221828' containing sample 'Escherichia coli HVH 141 (4-5995973)'
1 ILLUMINA (Illumina HiSeq 2000) run: 1.9M spots, 385.2M bases, 187.9Mb downloads

UUID: a6a6e489-a6f0-4553-9a09-fe13150725e3
Design: Illumina sequencing of Escherichia coli HVH 141 (4-5995973) via random selection
Submitted by: Broad Institute (BI)
Study: E coli UTI Bacteremia
PRJNA186173 • SRP019105 • All experiments • All runs
Sample: Pathogen bacterial, clinical or host-associated sample from Escherichia coli HVH 141 (4-5995973)
SAMN01885786 • SRS399651 • All experiments • All runs
Organism: Escherichia coli HVH 141 (4-5995973)
Library:
Name: Pond-221828
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
1  forward102  reverse

Experiment attributes: (show all 12 attributes...) (hide...)
analysis_type: AssemblyWithReference
gssr_id: 289735.0
library_type: WholeGenomeShotgun
lsid: broadinstitute.org:bsp.prod.sample:3VHMK
material_type: DNA:DNA Somatic
product_order: PDO-291
product_part_number: P-MCV-0001
project: G30152
research_project: RP-192
root_sample_id: SM-2TD14
sample_id: SM-3VHMK
work_request: 35112
Pipeline: show...hide...
NameStepProgramVersionNotes
base caller2013-03-08 22:34:25.0GAPipelineRTA1.15.19.5Sequencer Application 1.6.8.6
Runs: 1 run, 1.9M spots, 385.2M bases, 187.9Mb
Run# of Spots# of BasesSizePublished
SRR7841561,906,844385.2M187.9Mb2013-03-18

ID:
351014

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